SubtiBank SubtiBank
ysfB [2017-11-08 19:31:51]
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ysfB [2017-11-08 19:31:51]

carbohydrate diacid transcriptional activator
locus
BSU28670
pI
6.21
mw
42.45 kDa
protein length
368 aa Sequence Blast
gene length
1104 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    2,931,976 → 2,933,082

    The protein

    Protein family

  • cdaR family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|1CA0A8FEB0B127C2E70B35F3D3B28C3ADEED8DB5|ysfB]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B248 (ysfB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1247 NBRP B. subtilis, Japan]
  • BKE28670 (Δ[gene|1CA0A8FEB0B127C2E70B35F3D3B28C3ADEED8DB5|ysfB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGCGTTCCCCCTCATCA, downstream forward: _UP4_TAGAGAGAGTTTCAGTTTCA
  • BKK28670 (Δ[gene|1CA0A8FEB0B127C2E70B35F3D3B28C3ADEED8DB5|ysfB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGCGTTCCCCCTCATCA, downstream forward: _UP4_TAGAGAGAGTTTCAGTTTCA